Short introduction paper in different ares in computational biology.
Fran Lewitter, Welcome to PLoS Computational Biology “Education”
Kenzie D MacIsaac, Ernest Fraenkel, Practical Strategies for Discovering Regulatory DNA Sequence Motifs, April 2006
Duncan Brown, Kimmen Sjölander, Functional Classification Using Phylogenomic Inference,June 2006
Philip E Bourne, Johanna McEntyre, Biocurators: Contributors to the World of Science,October 2006
Yuan Qi, Hui Ge, Modularity and Dynamics of Cellular Networks, December 2006
Peter Schattner, Automated Querying of Genome Databases, January 2007
Deciphering Protein–Protein Interactions. Part I. Experimental Techniques and Databases
Benjamin A Shoemaker, Anna R Panchenko, March 2007
Deciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction Partners
Benjamin A Shoemaker, Anna R Panchenko, April 2007
Machine Learning and Its Applications to Biology
Adi L Tarca, Vincent J Carey, Xue-wen Chen, Roberto Romero, Sorin Drăghici, June 2007
Introduction to Computational Proteomics
Jacques Colinge, Keiryn L Bennett, July, 2007
Recent Evolutions of Multiple Sequence Alignment Algorithms
Cédric Notredame , August 2007
A Primer on Learning in Bayesian Networks for Computational Biology
Chris J Needham, James R Bradford, Andrew J Bulpitt, David R Westhead, August 2007
From Pathways Databases to Network Models of Switching Behavior
Baltazar D Aguda, Andrew B Goryachev, Sep, 2007
A Primer on Python for Life Science Researchers
Sebastian Bassi,November 2007
Strategies for Identifying RNA Splicing Regulatory Motifs and Predicting Alternative Splicing Events
Dirk Holste, Uwe Ohler, 01/2008
Comprehensive Analysis of Affymetrix Exon Arrays Using BioConductor
Michał J Okoniewski, Crispin J Miller, 02/2008
A Quick Guide for Computer-Assisted Instruction in Computational Biology and Bioinformatics
Manuel João Costa, Eduardo Galembeck, Guilherme A. Marson, Bayardo B. Torres, 04/2008
An Introduction to Bioinformatics for Glycomics Research
Kiyoko F. Aoki-Kinoshita,05/2008
Mean-Fields and Neural Masses
Karl Friston, 07/2008
Advanced Genomic Data Mining
Xosé M. Fernández-Suárez, Ewan Birney, 09/2008
Structure-Guided Comparative Analysis of Proteins: Principles, Tools, and Applications for Predicting Function
Raja Mazumder, Sona Vasudevan, 09/2008
The Rough Guide to In Silico Function Prediction, or How To Use Sequence and Structure Information To Predict Protein Function
Marco Punta, Yanay Ofran, 10/2008
Support Vector Machines and Kernels for Computational Biology
Asa Ben-Hur, Cheng Soon Ong, Sören Sonnenburg, Bernhard Schölkopf, Gunnar Rätsch, 10/2008
Analyzing ChIP-chip Data Using Bioconductor
Joern Toedling, Wolfgang Huber, 11/2008
A Primer on Regression Methods for Decoding cis-Regulatory Logic
Debopriya Das, Matteo Pellegrini, Joe W. Gray, 01/2009
A Quick Guide to Organizing Computational Biology Projects
William Stafford Noble, 07/2009
A Quick Guide to Teaching R Programming to Computational Biology Students
Stephen J. Eglen, 08/2009
A Quick Guide for Developing Effective Bioinformatics Programming Skills
Joel T. Dudley, Atul J. Butte,12/2009
Biomedical Text Mining and Its Applications
Raul Rodriguez-Esteban, 12/2009
Introduction to the Quantitative Analysis of Two-Dimensional Fluorescence Microscopy Images for Cell-Based Screening
Vebjorn Ljosa, Anne E. Carpenter, 12/2009
How to Understand the Cell by Breaking It: Network Analysis of Gene Perturbation Screens
Florian Markowetz, 01/2010
A Quick Guide to Large-Scale Genomic Data Mining
Curtis Huttenhower, Oliver Hofmann, 05/2010
Making Informed Choices about Microarray Data Analysis
Mark Reimers, 05,2010
Protein–Protein Interactions Essentials: Key Concepts to Building and Analyzing Interactome Networks
Javier De Las Rivas, Celia Fontanillo, 06/2010
An Introduction to Biomolecular Graphics
Cameron Mura, Colin M. McCrimmon, Jason Vertrees, Michael R. Sawaya, 08/2010
Pattern Recognition Software and Techniques for Biological Image Analysis
Lior Shamir, John D. Delaney, Nikita Orlov, D. Mark Eckley, Ilya G. Goldberg, 11/2010
Pathway Analysis of Expression Data: Deciphering Functional Building Blocks of Complex Diseases
Frank Emmert-Streib, Galina V. Glazko, 05/2011
Biomedical Cloud Computing With Amazon Web Services
Vincent A. Fusaro, Prasad Patil, Erik Gafni, Dennis P. Wall, Peter J. Tonellato, 08/2011
Integrating Bioinformatics Tools to Handle Glycosylation
Yuliet Mazola, Glay Chinea, Alexis Musacchio
BeadArray Expression Analysis Using Bioconductor
Matthew E. Ritchie, Mark J. Dunning, Mike L. Smith, Wei Shi, Andy G. Lynch
Computational Mass Spectrometry–Based Proteomics
Lukas Käll, Olga Vitek
Thermodynamic State Ensemble Models of cis-Regulation
Marc S. Sherman, Barak A. Cohen
Accessible High-Throughput Virtual Screening Molecular Docking Software for Students and Educators
Reed B. Jacob, Tim Andersen, Owen M. McDougal
Crossing Over…Markov Meets Mendel
Saad Mneimneh
Computational Genomics & Medicine 